Farhana Desai, R.K. Kamat, Calculation and Visualization Phylogeny of Clusters Using Java API (Application Programming Interface), Journal of Engineering and Applied Sciences, Volume 12,Issue 11, 2017, Pages 2827-2830, ISSN 1816-949x, jeasci.2017.2827.2830, (https://makhillpublications.co/view-article.php?doi=jeasci.2017.2827.2830) Abstract: To measure similarity between clusters in genetic sequences graphical access is the simplest way to do it. Hence, to show the hierarchical relationships between clusters pie chart and bar graph are used in this study which are developed using java Application Programming Interface (API). The input to the graph is the set of all closest clusters calculated from the distance matrix. The combination of a distance matrix using clustering algorithm with the visualization technique used provides a powerful description for data extraction and representation. Keywords: Java;residue;cluster;pie chart;bar graph